Installation¶

Dynamical Components Analysis (DCA) is available for Python 3. The latest development version of the code can be installed from https://github.com/BouchardLab/DynamicalComponentsAnalysis

# use ssh
$ git clone git@github.com:BouchardLab/DynamicalComponentsAnalysis.git
# or use https
$ git clone https://github.com/BouchardLab/DynamicalComponentsAnalysis.git
$ cd DynamicalComponentsAnalysis

To install into an active conda environment

$ conda env update --file environment.yml
$ pip install -e .

and with pip

$ pip install -e . -r requirements.txt

Requirements¶

Runtime¶

DCA requires

numpy

scipy

h5py

pandas

scikit-learn

pytorch

to run.

Develop¶

To develop DCA you will additionally need

pytest

flake8

to run the tests and check formatting.

Docs¶

To build the docs you will additionally need

sphinx

sphinx_rtd_theme